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18 Open 55 Closed
18 Open 55 Closed
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Issues list

Failed to run hmmeralign
#139 opened Nov 30, 2024 by Lee-lab888
Conda installation for Python 3.11
#131 opened Oct 10, 2023 by mloberme
2
UPP hangs with no error or info given
#128 opened Aug 3, 2023 by aravenscraft
Packaged pplacer produces segmentation fault
#121 opened Jun 29, 2022 by rpetit3
4
TIPP2 doesn't work with SEPP bioconda recipe
#102 opened Jan 22, 2021 by nick-youngblut
6
AttributeError: 'Namespace' object has no attribute 'pasta'
#96 opened Nov 15, 2020 by Omdeno
4
Is there a reason SEPP would need HMMER 3.1b2 specifically ?
#76 opened Dec 10, 2019 by ppericard
23
sepp should reject distant sequences enhancement
#73 opened Jul 9, 2019 by sjanssen2
3
configure mafft location
#42 opened Mar 18, 2019 by bruceamurphy
3
Add Selenocysteine ("U") to the set of amino acids enhancement
#39 opened Oct 5, 2018 by andrewalverson
3
Support for pplacer refpkgs
#17 opened Apr 18, 2017 by geronimp
2
TIPP zip file fails to work on MAC
#12 opened May 19, 2015 by namphuon
1
Default UPP alignment size to 10 enhancement
#11 opened May 19, 2015 by namphuon
@namphuon
1
UPP: log (INFO) the number of sequences deemed fragmentary enhancement
#9 opened Mar 17, 2015 by smirarab
SEPP hangs, and fails to finish or proceed on rare instances bug
#5 opened Mar 21, 2013 by smirarab
Making alignment outputs optional enhancement
#4 opened Mar 15, 2013 by smirarab
Not Breaking edges in placement decomposition enhancement
#2 opened Feb 13, 2013 by smirarab
Merger outputs in old json format enhancement
#1 opened Feb 13, 2013 by smirarab
ProTip! no:milestone will show everything without a milestone.