update docs 12/3/24 + update endpoint labels + mdx query/metadata sec…

…tions

docs/automat/alliance-of-genome-resources.tag.mdx

@@ -24,10 +24,17 @@ The Alliance of Genome Resources is a consortium of the owners of seven model or
 
 
 
+
+## Query Endpoints
 ```mdx-code-block
 import DocCardList from '@theme/DocCardList';
 import {useCurrentSidebarCategory} from '@docusaurus/theme-common';
 
-<DocCardList items={useCurrentSidebarCategory().items}/>
+<DocCardList items={useCurrentSidebarCategory().items.slice(0, 5)}/>
+```
+
+## Metadata Endpoints    
+```mdx-code-block
+<DocCardList items={useCurrentSidebarCategory().items.slice(5)}/>
 ```
 

docs/automat/automat.info.mdx

@@ -0,0 +1,21 @@
+---
+id: automat
+title: "Automat"
+description: ""
+sidebar_label: Introduction
+sidebar_position: 0
+hide_title: true
+custom_edit_url: null
+---
+
+import ApiLogo from "@theme/ApiLogo";
+import SchemaTabs from "@theme/SchemaTabs";
+import TabItem from "@theme/TabItem";
+import Export from "@theme/ApiExplorer/Export";
+
+<span className={"theme-doc-version-badge badge badge--secondary"}>Version: 3.0</span>
+
+<h1 className={"openapi__heading"}>Automat</h1>
+
+<div style={{"marginBottom":"var(--ifm-paragraph-margin-bottom)"}}><h3 style={{"marginBottom":"0.25rem"}}>Terms of Service</h3><a href={"http://loading"}>http://loading</a></div>
+

docs/automat/binding.tag.mdx

@@ -24,10 +24,17 @@ Binding DataBase (BindingDB) openly exposes curated data on chemical entities an
 
 
 
+
+## Query Endpoints
 ```mdx-code-block
 import DocCardList from '@theme/DocCardList';
 import {useCurrentSidebarCategory} from '@docusaurus/theme-common';
 
-<DocCardList items={useCurrentSidebarCategory().items}/>
+<DocCardList items={useCurrentSidebarCategory().items.slice(0, 5)}/>
+```
+
+## Metadata Endpoints    
+```mdx-code-block
+<DocCardList items={useCurrentSidebarCategory().items.slice(5)}/>
 ```
 

docs/automat/cam-kg.tag.mdx

@@ -24,10 +24,17 @@ The CAM KG contains data on CAMs (Causal Activity Models), which are small knowl
 
 
 
+
+## Query Endpoints
 ```mdx-code-block
 import DocCardList from '@theme/DocCardList';
 import {useCurrentSidebarCategory} from '@docusaurus/theme-common';
 
-<DocCardList items={useCurrentSidebarCategory().items}/>
+<DocCardList items={useCurrentSidebarCategory().items.slice(0, 5)}/>
+```
+
+## Metadata Endpoints    
+```mdx-code-block
+<DocCardList items={useCurrentSidebarCategory().items.slice(5)}/>
 ```
 

docs/automat/ctd.tag.mdx

@@ -24,10 +24,17 @@ The Comparative Toxicogenomics Database (CTD) is an open-source database that pr
 
 
 
+
+## Query Endpoints
 ```mdx-code-block
 import DocCardList from '@theme/DocCardList';
 import {useCurrentSidebarCategory} from '@docusaurus/theme-common';
 
-<DocCardList items={useCurrentSidebarCategory().items}/>
+<DocCardList items={useCurrentSidebarCategory().items.slice(0, 5)}/>
+```
+
+## Metadata Endpoints    
+```mdx-code-block
+<DocCardList items={useCurrentSidebarCategory().items.slice(5)}/>
 ```
 

docs/automat/cypher-cypher-post-binding-db.api.mdx

@@ -5,7 +5,7 @@ description: "Runs a cypher query against the Neo4j instance, and returns an equ
 sidebar_label: "Run a Neo4j cypher query."
 hide_title: true
 hide_table_of_contents: true
-api: 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
+api: eJzVVUtPGzEQ/iuWTyAlWUQ55cZLBakEGkIvKUKOd5I17NrG9lKiVf47M/YmWUhF22MTKesdz3zzzTMNz8FLp2xQRvMhH9faM8Hk0hbg2HMNbsnEQijtAwsFsBGYo0dGr0JL6DGhc+Yg1I7MNIPnWr2IEnRAqbdGe2DwakEGyNncmQqxE8TFZHLDQOfWKFTeK0Kwfphlmi4H0lRZbqTPECT040nWziFstj/gPW4sOEGML3PknMg+tA9rfHiYKZ0rvejnM9R2yApxTky+5MOGS6MDItFRWFsqGZGyR08JaLiXBVSCTkGFEhD/NAKPE0qLpxyg6ymPGeL3PR6WlnTN7BGDRSXriGRQ4AkqqXUwv0fBxswHh3T5arXqcXgVlSWljRm/Op6cXrA9vc/G55O78YhJU+uA78liSyi4GqIg5T76Pjw4oMf7Ot/WUoL387pk41YZ2fxtalbR7dHh4S7wD1GqPJqxc+eM+wfUTXKoN7Y4a5jPM5xDEKrsopwlycZQOCco5SpA5buKu666FS6NREnlF2ukPxabLDrw30wK+BMmQi+v5+is+dgPvY0EpwQW4PjqnlJPdDourrCUYgG7/bQWbFVjiGxC0t90X/vBG7HwFP3J5ejscvSVgq4gFIbmjSaMghahwLdsO2tZGkG88+BewPkYUu2wLHw94M7MzJOxfVEHU4kwwI7wA5xsqQbGIQd0RI0x3s7s+e48bMNTem664R0nWKRA/lNLfhkcUKzgKn89v0VmSkLLCAmVRuQtGAVWidiUWlSQ1uFmY3V3Ii2hd33fWSv/yQ5tax/gNWS2RHaUgVirpi3tlL9bo21xsUAFNQBeN81MeLhz5WpF4rY6Uzy+CKfEjCoyvUfYAkSOptQNT0AFPE3J6rd9iOHWcTA+rgcagGRxjPvKhk91uz16c307QeVZu/Mrk5ONE79ouvF3yH/iN/6VEEKcwijH8RV6UdM0DXnCpc8bTrN5AA==
 sidebar_class_name: "post api-method"
 info_path: docs/automat/automat
 custom_edit_url: null
@@ -30,13 +30,15 @@ import TabItem from "@theme/TabItem";
 
 Runs a cypher query against the Neo4j instance, and returns an equivalent response expected from a Neo4j HTTP endpoint (https://neo4j.com/docs/rest-docs/current/).
 
+<details><summary>Schema</summary>
+
 ## Request
 
 <MimeTabs className={"openapi-tabs__mime"}><TabItem label={"application/json"} value={"application/json-schema"}><details style={{}} className={"openapi-markdown__details mime"} data-collapsed={false} open={true}><summary style={{}} className={"openapi-markdown__details-summary-mime"}><h3 className={"openapi-markdown__details-summary-header-body"}>Body</h3><strong className={"openapi-schema__required"}>required</strong></summary><div style={{"textAlign":"left","marginLeft":"1rem"}}></div><ul style={{"marginLeft":"1rem"}}><SchemaItem collapsible={false} name={"query"} required={true} schemaName={"Query"} qualifierMessage={undefined} schema={{"title":"Query","type":"string"}}></SchemaItem></ul></details></TabItem></MimeTabs><div><div><ApiTabs><TabItem label={"200"} value={"200"}><div>
 
 Successful Response
 
-</div><div><MimeTabs className={"openapi-tabs__mime"} schemaType={"response"}><TabItem label={"application/json"} value={"application/json"}><SchemaTabs className={"openapi-tabs__schema"}><TabItem label={"Schema"} value={"Schema"}><details style={{}} className={"openapi-markdown__details response"} data-collapsed={false} open={true}><summary style={{}} className={"openapi-markdown__details-summary-response"}><strong>Schema</strong></summary><div style={{"textAlign":"left","marginLeft":"1rem"}}></div><ul style={{"marginLeft":"1rem"}}><SchemaItem collapsible={true} className={"schemaItem"}><details style={{}} className={"openapi-markdown__details"}><summary style={{}}><span className={"openapi-schema__container"}><strong className={"openapi-schema__property"}>results</strong><span className={"openapi-schema__name"}> object[]</span><span className={"openapi-schema__divider"}></span><span className={"openapi-schema__required"}>required</span></span></summary><div style={{"marginLeft":"1rem"}}><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem","paddingBottom":".5rem"}}>Array [</div></li><SchemaItem collapsible={false} name={"columns"} required={true} schemaName={"string[]"} qualifierMessage={undefined} schema={{"title":"Columns","type":"array","items":{"type":"string"}}}></SchemaItem><SchemaItem collapsible={true} className={"schemaItem"}><details style={{}} className={"openapi-markdown__details"}><summary style={{}}><span className={"openapi-schema__container"}><strong className={"openapi-schema__property"}>data</strong><span className={"openapi-schema__name"}> object[]</span><span className={"openapi-schema__divider"}></span><span className={"openapi-schema__required"}>required</span></span></summary><div style={{"marginLeft":"1rem"}}><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem","paddingBottom":".5rem"}}>Array [</div></li><SchemaItem collapsible={false} name={"row"} required={true} schemaName={"undefined[]"} qualifierMessage={undefined} schema={{"title":"Row","type":"array","items":{}}}></SchemaItem><SchemaItem collapsible={false} name={"meta"} required={true} schemaName={"undefined[]"} qualifierMessage={undefined} schema={{"title":"Meta","type":"array","items":{}}}></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem><SchemaItem collapsible={true} className={"schemaItem"}><details style={{}} className={"openapi-markdown__details"}><summary style={{}}><span className={"openapi-schema__container"}><strong className={"openapi-schema__property"}>errors</strong><span className={"openapi-schema__name"}> object[]</span><span className={"openapi-schema__divider"}></span><span className={"openapi-schema__required"}>required</span></span></summary><div style={{"marginLeft":"1rem"}}><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem","paddingBottom":".5rem"}}>Array [</div></li><SchemaItem collapsible={false} name={"code"} required={true} schemaName={"Code"} qualifierMessage={undefined} schema={{"title":"Code","type":"string"}}></SchemaItem><SchemaItem collapsible={false} name={"message"} required={true} schemaName={"Message"} qualifierMessage={undefined} schema={{"title":"Message","type":"string"}}></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem></ul></details></TabItem><TabItem label={"Example (from schema)"} value={"Example (from schema)"}><ResponseSamples responseExample={"{\n  \"results\": [\n    {\n      \"columns\": [\n        \"string\"\n      ],\n      \"data\": [\n        {\n          \"row\": [\n            null\n          ],\n          \"meta\": [\n            null\n          ]\n        }\n      ]\n    }\n  ],\n  \"errors\": [\n    {\n      \"code\": \"string\",\n      \"message\": \"string\"\n    }\n  ]\n}"} language={"json"}></ResponseSamples></TabItem></SchemaTabs></TabItem></MimeTabs></div></TabItem><TabItem label={"422"} value={"422"}><div>
+</div><div><MimeTabs className={"openapi-tabs__mime"} schemaType={"response"}><TabItem label={"application/json"} value={"application/json"}><SchemaTabs className={"openapi-tabs__schema"}><TabItem label={"Schema"} value={"Schema"}><details style={{}} className={"openapi-markdown__details response"} data-collapsed={false} open={true}><summary style={{}} className={"openapi-markdown__details-summary-response"}><strong>Schema</strong></summary><div style={{"textAlign":"left","marginLeft":"1rem"}}></div><ul style={{"marginLeft":"1rem"}}>any</ul></details></TabItem></SchemaTabs></TabItem></MimeTabs></div></TabItem><TabItem label={"422"} value={"422"}><div>
 
 Validation Error
 
@@ -49,4 +51,5 @@ string
 integer
 
 </div></TabItem></SchemaTabs></div><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem><SchemaItem collapsible={false} name={"msg"} required={true} schemaName={"Message"} qualifierMessage={undefined} schema={{"title":"Message","type":"string"}}></SchemaItem><SchemaItem collapsible={false} name={"type"} required={true} schemaName={"Error Type"} qualifierMessage={undefined} schema={{"title":"Error Type","type":"string"}}></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem></ul></details></TabItem><TabItem label={"Example (from schema)"} value={"Example (from schema)"}><ResponseSamples responseExample={"{\n  \"detail\": [\n    {\n      \"loc\": [\n        \"string\",\n        0\n      ],\n      \"msg\": \"string\",\n      \"type\": \"string\"\n    }\n  ]\n}"} language={"json"}></ResponseSamples></TabItem></SchemaTabs></TabItem></MimeTabs></div></TabItem></ApiTabs></div></div>
-
+
+</details>