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307 changes: 233 additions & 74 deletions api/openapi.json

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8 changes: 4 additions & 4 deletions docs/automat/alliance-of-genome-resources.tag.mdx
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The Alliance of Genome Resources is a consortium of the owners of seven model organism databases (MODs) and the Gene Ontology (GO) Consortium, whose goal is to provide an integrated view of their data to all biologists, clinicians, and other interested parties. The Alliance provides the results of all methods that have been benchmarked by the Quest for Orthologs Consortium (QfO), as well as curated ortholog inferences from HGNC (human, mouse, rat genes).

**Version:** 85a6ce01fb7d2cbe
**Version:** 06e2a3c1eeea5251

**URL:** [https://www.alliancegenome.org/](https://www.alliancegenome.org/)

**Files:** [https://stars.renci.org/var/plater/bl-4.1.6/GenomeAllianceOrthologs_Automat/85a6ce01fb7d2cbe](https://stars.renci.org/var/plater/bl-4.1.6/GenomeAllianceOrthologs_Automat/85a6ce01fb7d2cbe)
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8 changes: 4 additions & 4 deletions docs/automat/binding.tag.mdx
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Binding DataBase (BindingDB) openly exposes curated data on chemical entities and their molecular targets.

**Version:** 57e22a8a314b0df8
**Version:** 9164067231dc9b8c

**URL:** [https://www.bindingdb.org/](https://www.bindingdb.org/)

**Files:** [https://stars.renci.org/var/plater/bl-4.2.0/BINDING_Automat/57e22a8a314b0df8](https://stars.renci.org/var/plater/bl-4.2.0/BINDING_Automat/57e22a8a314b0df8)
**Files:** [https://stars.renci.org/var/plater/bl-4.2.1/BINDING_Automat/9164067231dc9b8c](https://stars.renci.org/var/plater/bl-4.2.1/BINDING_Automat/9164067231dc9b8c)

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8 changes: 4 additions & 4 deletions docs/automat/cam-kg.tag.mdx
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The CAM KG contains data on CAMs (Causal Activity Models), which are small knowledge graphs built using the Web Ontology Language (OWL). The CAM database combines many CAM graphs, along with a large merged bio-ontology containing the full vocabulary of concepts referenced within the individual CAMs. Each CAM describes an instantiation of some of those concepts in a particular context, modeling the interactions between those instances as an interlinked representation of a complex biological or environmental process.

**Version:** dfdb15b2ecef5629
**Version:** e92bd7b217535f2d



**Files:** [https://stars.renci.org/var/plater/bl-4.2.0/CAMKP_Automat/dfdb15b2ecef5629](https://stars.renci.org/var/plater/bl-4.2.0/CAMKP_Automat/dfdb15b2ecef5629)
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8 changes: 4 additions & 4 deletions docs/automat/ctd.tag.mdx
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The Comparative Toxicogenomics Database (CTD) is an open-source database that provides manually curated information about chemical-gene/protein, chemical-disease, and gene/protein-disease relationships, with additional support for the curated relationships provided by function and pathway data.

**Version:** 8b5f74462c4179ca
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**URL:** [http://ctdbase.org/about/](http://ctdbase.org/about/)

**Files:** [https://stars.renci.org/var/plater/bl-4.2.0/CTD_Automat/8b5f74462c4179ca](https://stars.renci.org/var/plater/bl-4.2.0/CTD_Automat/8b5f74462c4179ca)
**Files:** [https://stars.renci.org/var/plater/bl-4.2.1/CTD_Automat/f92c663160ec5e36](https://stars.renci.org/var/plater/bl-4.2.1/CTD_Automat/f92c663160ec5e36)

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4 changes: 2 additions & 2 deletions docs/automat/cypher-cypher-post-binding-db.api.mdx
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Expand Up @@ -5,7 +5,7 @@ description: "Runs a cypher query against the Neo4j instance, and returns an equ
sidebar_label: "Run a Neo4j cypher query."
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Successful Response

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Validation Error

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4 changes: 2 additions & 2 deletions docs/automat/cypher-cypher-post-cam-kp.api.mdx
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Expand Up @@ -5,7 +5,7 @@ description: "Runs a cypher query against the Neo4j instance, and returns an equ
sidebar_label: "Run a Neo4j cypher query."
hide_title: true
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Expand Down Expand Up @@ -36,7 +36,7 @@ Runs a cypher query against the Neo4j instance, and returns an equivalent respon

Successful Response

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</div><div><MimeTabs className={"openapi-tabs__mime"} schemaType={"response"}><TabItem label={"application/json"} value={"application/json"}><SchemaTabs className={"openapi-tabs__schema"}><TabItem label={"Schema"} value={"Schema"}><details style={{}} className={"openapi-markdown__details response"} data-collapsed={false} open={true}><summary style={{}} className={"openapi-markdown__details-summary-response"}><strong>Schema</strong></summary><div style={{"textAlign":"left","marginLeft":"1rem"}}></div><ul style={{"marginLeft":"1rem"}}><SchemaItem collapsible={true} className={"schemaItem"}><details style={{}} className={"openapi-markdown__details"}><summary style={{}}><span className={"openapi-schema__container"}><strong className={"openapi-schema__property"}>results</strong><span className={"openapi-schema__name"}> object[]</span><span className={"openapi-schema__divider"}></span><span className={"openapi-schema__required"}>required</span></span></summary><div style={{"marginLeft":"1rem"}}><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem","paddingBottom":".5rem"}}>Array [</div></li><SchemaItem collapsible={false} name={"columns"} required={true} schemaName={"string[]"} qualifierMessage={undefined} schema={{"title":"Columns","type":"array","items":{"type":"string"}}}></SchemaItem><SchemaItem collapsible={true} className={"schemaItem"}><details style={{}} className={"openapi-markdown__details"}><summary style={{}}><span className={"openapi-schema__container"}><strong className={"openapi-schema__property"}>data</strong><span className={"openapi-schema__name"}> object[]</span><span className={"openapi-schema__divider"}></span><span className={"openapi-schema__required"}>required</span></span></summary><div style={{"marginLeft":"1rem"}}><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem","paddingBottom":".5rem"}}>Array [</div></li><SchemaItem collapsible={false} name={"row"} required={true} schemaName={"undefined[]"} qualifierMessage={undefined} schema={{"title":"Row","type":"array","items":{}}}></SchemaItem><SchemaItem collapsible={false} name={"meta"} required={true} schemaName={"undefined[]"} qualifierMessage={undefined} schema={{"title":"Meta","type":"array","items":{}}}></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem><SchemaItem collapsible={true} className={"schemaItem"}><details style={{}} className={"openapi-markdown__details"}><summary style={{}}><span className={"openapi-schema__container"}><strong className={"openapi-schema__property"}>errors</strong><span className={"openapi-schema__name"}> object[]</span><span className={"openapi-schema__divider"}></span><span className={"openapi-schema__required"}>required</span></span></summary><div style={{"marginLeft":"1rem"}}><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem","paddingBottom":".5rem"}}>Array [</div></li><SchemaItem collapsible={false} name={"code"} required={true} schemaName={"Code"} qualifierMessage={undefined} schema={{"title":"Code","type":"string"}}></SchemaItem><SchemaItem collapsible={false} name={"message"} required={true} schemaName={"Message"} qualifierMessage={undefined} schema={{"title":"Message","type":"string"}}></SchemaItem><li><div style={{"fontSize":"var(--ifm-code-font-size)","opacity":"0.6","marginLeft":"-.5rem"}}>]</div></li></div></details></SchemaItem></ul></details></TabItem><TabItem label={"Example (from schema)"} value={"Example (from schema)"}><ResponseSamples responseExample={"{\n \"results\": [\n {\n \"columns\": [\n \"string\"\n ],\n \"data\": [\n {\n \"row\": [\n null\n ],\n \"meta\": [\n null\n ]\n }\n ]\n }\n ],\n \"errors\": [\n {\n \"code\": \"string\",\n \"message\": \"string\"\n }\n ]\n}"} language={"json"}></ResponseSamples></TabItem></SchemaTabs></TabItem></MimeTabs></div></TabItem><TabItem label={"422"} value={"422"}><div>

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