Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add changes to ensure azlinux and mcrypt images are working fine #2682

Open
wants to merge 9 commits into
base: master
Choose a base branch
from

Conversation

nss10
Copy link
Contributor

@nss10 nss10 commented Dec 10, 2024

Add changes to fence related deploy yamls, to provide backwards compatibility with fence images using azlinux and old docker file with python3.9-buster-2.0.0 image

@@ -93,7 +93,7 @@ spec:
name: "projects"
containers:
- name: usersync
GEN3_FENCE_IMAGE
GEN3_FENCE_MCRYPT_IMAGE
Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I think adding this, enforces all commons to have fence_mcrypt in their manifest and doesn't seem like a great idea

Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Yeah... It will force every job to use the new image for the usersync job regardless of if they're using the latest Fence, which is going to change what every Prod env runs without them explicitly updating a manifest or anything. We shouldn't do this. It doesn't allow someone to test the update in a staging/preprod before deploying in prod. We want to only use this new image if they're deploying the new Fence as configured in the manifest. Maybe we need a new manifest entry

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I suggested adding a new fence_mcrypt image line in the manifest's versions, specifically for jobs where usersync requires this branch. The team would then need to manually update the usersync job in the AdminVM.

Need opinions.

AlbertSnows
AlbertSnows previously approved these changes Dec 11, 2024
Copy link

@AlbertSnows AlbertSnows left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Approved assuming the pipeline issues are resolved. can you add a description to the PR so I or other reviewers have a better understanding of the purposes of these changes? The PR looks fine, but due to lack of context there may be things I am missing. Getting another review from someone else will also be beneficial.

Copy link

Please find the ci env pod logs here

Copy link

github-actions bot commented Jan 8, 2025

Please find the ci env pod logs here

@nss10 nss10 marked this pull request as ready for review January 9, 2025 14:04
@nss10 nss10 requested review from Avantol13 and BinamB January 9, 2025 14:04
jawadqur
jawadqur previously approved these changes Jan 10, 2025
Copy link

Please find the ci env pod logs here

@uc-cdis uc-cdis deleted a comment from github-actions bot Jan 14, 2025
@uc-cdis uc-cdis deleted a comment from github-actions bot Jan 14, 2025
Copy link

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#ffa500}{\tt{tests/test\_data\_upload.py}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{9}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_audit\_service.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_indexing\_page.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{18}}$$ $$\textcolor{#f14c4c}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{2}}$$ $$\textcolor{#f14c4c}{\tt{22}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Copy link

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#ffa500}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{4}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#ffa500}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{6}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#ffa500}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{4}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{4}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{6}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Copy link

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#23d18b}{\tt{tests/test\_oauth2.py}}$$ $$\textcolor{#23d18b}{\tt{15}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{15}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_centralized\_auth.py}}$$ $$\textcolor{#23d18b}{\tt{16}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{16}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_graph\_submit\_and\_query.py}}$$ $$\textcolor{#23d18b}{\tt{13}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{14}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_data\_upload.py}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{9}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_guppy\_service.py}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{8}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_presigned\_url.py}}$$ $$\textcolor{#23d18b}{\tt{7}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{7}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_requestor.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_user\_token.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_audit\_service.py}}$$ $$\textcolor{#23d18b}{\tt{4}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_drs\_endpoint.py}}$$ $$\textcolor{#23d18b}{\tt{4}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{4}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_ras\_authn.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{3}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_study\_viewer.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{3}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_discoverypage.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_workspace.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_login\_page.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_oidc\_client.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_indexing\_page.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_aggregate\_mds.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_homepage.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_pfb\_export.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_gen3client.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_client\_credentials.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_metadata\_ingestion.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_etl.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_manifest\_service.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_gen3ff\_landing\_page.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{2}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_register\_user.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{2}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{110}}$$ $$\textcolor{#f14c4c}{\tt{3}}$$ $$\textcolor{#ffa500}{\tt{7}}$$ $$\textcolor{#f14c4c}{\tt{120}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#23d18b}{\tt{tests/test\_oauth2.py}}$$ $$\textcolor{#23d18b}{\tt{15}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{15}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_centralized\_auth.py}}$$ $$\textcolor{#23d18b}{\tt{16}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{16}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_graph\_submit\_and\_query.py}}$$ $$\textcolor{#23d18b}{\tt{13}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{14}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_data\_upload.py}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{9}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_guppy\_service.py}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{8}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_presigned\_url.py}}$$ $$\textcolor{#23d18b}{\tt{7}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{7}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_requestor.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_user\_token.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_audit\_service.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_drs\_endpoint.py}}$$ $$\textcolor{#23d18b}{\tt{4}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{4}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_study\_viewer.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{3}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_discoverypage.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_workspace.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_ras\_authn.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{3}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_indexing\_page.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_login\_page.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_homepage.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_oidc\_client.py}}$$ $$\textcolor{#23d18b}{\tt{2}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{2}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_pfb\_export.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_client\_credentials.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_gen3client.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_etl.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_manifest\_service.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_metadata\_ingestion.py}}$$ $$\textcolor{#23d18b}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{1}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_gen3ff\_landing\_page.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{2}}$$
$$\textcolor{#ffa500}{\tt{tests/test\_register\_user.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#ffa500}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{2}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_aggregate\_mds.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{110}}$$ $$\textcolor{#f14c4c}{\tt{3}}$$ $$\textcolor{#ffa500}{\tt{7}}$$ $$\textcolor{#f14c4c}{\tt{120}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#f14c4c}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_audit\_service.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#f14c4c}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{11}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

@uc-cdis uc-cdis deleted a comment from github-actions bot Jan 16, 2025
@uc-cdis uc-cdis deleted a comment from github-actions bot Jan 16, 2025
Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#f14c4c}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_audit\_service.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#f14c4c}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{11}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Copy link

Please find the ci env pod logs here

Copy link

filepath $$\textcolor{#23d18b}{\tt{passed}}$$ $$\textcolor{#f14c4c}{\tt{failed}}$$ $$\textcolor{#ffa500}{\tt{skipped}}$$ SUBTOTAL
$$\textcolor{#f14c4c}{\tt{tests/test\_dbgap.py}}$$ $$\textcolor{#23d18b}{\tt{3}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{5}}$$
$$\textcolor{#23d18b}{\tt{tests/test\_audit\_service.py}}$$ $$\textcolor{#23d18b}{\tt{5}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#23d18b}{\tt{5}}$$
$$\textcolor{#f14c4c}{\tt{tests/test\_google\_data\_access.py}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$ $$\textcolor{#666666}{\tt{0}}$$ $$\textcolor{#f14c4c}{\tt{1}}$$
$$\textcolor{#f14c4c}{\tt{TOTAL}}$$ $$\textcolor{#23d18b}{\tt{8}}$$ $$\textcolor{#f14c4c}{\tt{2}}$$ $$\textcolor{#ffa500}{\tt{1}}$$ $$\textcolor{#f14c4c}{\tt{11}}$$

Please find the detailed integration test report here

Please find the ci env pod logs here

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

5 participants