Input data files

• Generating GO-CAM data
• Disease data from MalaCards:
  • pombe-embl/external_data/disease/malacards_data_for_chado_mondo_ids.tsv
  • 5 columns:
    • MalaCards disease name
    • MalaCards disease slug
    • MalaCards displayed disease name
    • Human gene name
    • MONDO term ID
• PomBase curated disease data:
  • pombe-embl/external_data/disease/pombase_disease_associations_mondo_ids.txt
  • 6 columns:
    • systematic ID
    • gene name (optional)
    • term ID
    • reference ID
    • date in this format: 2020-05-17
• SGD genes
• PDB data
  • data file: pombe-embl/external_data/protein_structure/systematic_id_to_pdbe_mapping.tsv
  • See pombe-embl/external_data/protein_structure/README.txt for how to update the data file
• InterPro
  • /var/pomcur/sources/interpro/pombe_domain_results.json
  • See: /var/pomcur/sources/interpro/README