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    8 repositories

    • estimateR

      Public
      R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic
      epidemiologyoutbreakscovid-19
      R
      •
      Other
      •2•10•0•0•Updated Sep 10, 2024Sep 10, 2024

    • dailyRe-Data

      Public
      daily SARS-CoV2 Re Values for select countries. See https://ibz-shiny.ethz.ch/covid-19-re/ for interactive visualisations.
      covid-19covid19covid-datacovid19-data
      GNU General Public License v3.0
      •5•12•0•0•Updated Mar 23, 2023Mar 23, 2023

    • dailyRe

      Public
      Shiny App to display Re estimates (formerly contained in shiny-dailyRe repository)
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 8, 2023Feb 8, 2023

    • shiny-dailyRe

      Public
      R app for daily Covid-19 Re estimates
      shinycovid-19
      R
      •
      GNU General Public License v3.0
      •1•19•2•0•Updated Oct 12, 2022Oct 12, 2022

    • chCovidDashboard

      Public
      Covid-19 Dashboard for Switzerland
      R
      •
      GNU General Public License v3.0
      •2•3•1•1•Updated Jun 15, 2022Jun 15, 2022

    • paper-code

      Public
      Code for the manuscript "Estimation and worldwide monitoring of the effective reproductive number of SARS-CoV-2"
      R
      •3•1•0•0•Updated May 28, 2022May 28, 2022

    • variantPlot

      Public
      R
      •1•6•0•0•Updated Apr 1, 2021Apr 1, 2021

    • covid19-additionalData

      Public
      data repository for covid-19 additional data for shiny app
      covid-19
      GNU General Public License v3.0
      •0•2•0•0•Updated Jan 6, 2021Jan 6, 2021