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Increased/decreased chemical concentration in location #973

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Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
pattern_name: abnormallyDecreasedConcentrationOfChemicalEntityInLocation
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyDecreasedConcentrationOfChemicalEntityInLocation.yaml
description: "An abnormal decrease in concentration of a chemical, like sodium, in a location, like the blood."

classes:
decreased concentration: PATO:0001163
abnormal: PATO:0000460
chemical: CHEBI:24431
independent continuant: BFO:0000004

relations:
inheres_in: RO:0000052
has_modifier: RO:0002573
has_part: BFO:0000051
part_of: BFO:0000050

annotationProperties:
exact_synonym: oio:hasExactSynonym

vars:
chemical: "chemical"
location: "'independent continuant'"

name:
text: "abnormally decreased %s concentration in %s"
vars:
- chemical
- location


def:
text: "An abnormally decreased concentration of %s in %s."
vars:
- chemical
- location

equivalentTo:
text: "'has_part' some ('decreased concentration' and ('inheres_in' some (%s and ('part_of' some %s))) and ('has_modifier' some 'abnormal'))"
vars:
- chemical
- location

contributors:
- https://orcid.org/0000-0002-3528-5267
- https://orcid.org/0000-0002-9611-1279
Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
pattern_name: abnormallyIncreasedConcentrationOfChemicalEntityInLocation
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyIncreasedConcentrationOfChemicalEntityInLocation.yaml
description: "An abnormal increase in concentration of a chemical, like sodium, in a location, like the blood."

classes:
increased concentration: PATO:0001162
abnormal: PATO:0000460
chemical: CHEBI:24431
independent continuant: BFO:0000004

relations:
inheres_in: RO:0000052
has_modifier: RO:0002573
has_part: BFO:0000051
part_of: BFO:0000050

annotationProperties:
exact_synonym: oio:hasExactSynonym

vars:
chemical: "chemical"
location: "'independent continuant'"

name:
text: "abnormally increased %s concentration in %s"
vars:
- chemical
- location


def:
text: "An abnormally increased concentration of %s in %s."
vars:
- chemical
- location

equivalentTo:
text: "'has_part' some ('increased concentration' and ('inheres_in' some (%s and ('part_of' some %s))) and ('has_modifier' some 'abnormal'))"
vars:
- chemical
- location

contributors:
- https://orcid.org/0000-0002-3528-5267
- https://orcid.org/0000-0002-9611-1279
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