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regnerated allena mba from API. See also SciCrunch/NIF-Ontology#45
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cmungall committed Mar 6, 2018
1 parent b4a3b04 commit edd26ca
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Showing 3 changed files with 17,452 additions and 63 deletions.
10 changes: 3 additions & 7 deletions Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -1360,15 +1360,9 @@ bto-anat.obo:
# ABA
# ----------------------------------------

ALLENS = dmba hba dhba pba mba
ALLENS = dmba hba dhba pba mba glioblastoma



aba.obo: ABA-src.obo
./util/make-aba-part-ofs.pl $< > $@
bridge/aba.owl: aba.obo
owltools $< -o file://`pwd`/$@

allen_all: $(patsubst %,source-ontologies/allen-%.obo,$(ALLENS))
source-ontologies/allen-dmba.json:
wget http://api.brain-map.org/api/v2/structure_graph_download/17.json -O $@
Expand All @@ -1380,6 +1374,8 @@ source-ontologies/allen-pba.json:
wget http://api.brain-map.org/api/v2/structure_graph_download/8.json -O $@
source-ontologies/allen-mba.json:
wget http://api.brain-map.org/api/v2/structure_graph_download/1.json -O $@
source-ontologies/allen-glioblastoma.json:
wget http://api.brain-map.org/api/v2/structure_graph_download/10.json -O $@

source-ontologies/allen-%.obo: source-ontologies/allen-%.json
./util/allen-json2obo.pl $< > $@
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