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bumped variant annotator pom
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jonbaber committed Apr 3, 2019
1 parent ddd5fec commit 349b586
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Showing 2 changed files with 8 additions and 8 deletions.
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ALTER TABLE structuralVariant ADD COLUMN startAnchoringSupportDistance int after insertSequenceRepeatCoverage;
ALTER TABLE structuralVariant ADD COLUMN endAnchoringSupportDistance int after startAnchoringSupportDistance;
ALTER TABLE structuralVariant CHANGE COLUMN startTumourVariantFragmentCount startTumorVariantFragmentCount int;
ALTER TABLE structuralVariant CHANGE COLUMN startTumourReferenceFragmentCount startTumorReferenceFragmentCount int;
ALTER TABLE structuralVariant CHANGE COLUMN endTumourVariantFragmentCount endTumorVariantFragmentCount int;
ALTER TABLE structuralVariant CHANGE COLUMN endTumourReferenceFragmentCount endTumorReferenceFragmentCount int;
ALTER TABLE structuralVariant
ADD COLUMN startAnchoringSupportDistance int after insertSequenceRepeatCoverage,
ADD COLUMN endAnchoringSupportDistance int after startAnchoringSupportDistance,
CHANGE COLUMN startTumourVariantFragmentCount startTumorVariantFragmentCount int,
CHANGE COLUMN startTumourReferenceFragmentCount startTumorReferenceFragmentCount int,
CHANGE COLUMN endTumourVariantFragmentCount endTumorVariantFragmentCount int,
CHANGE COLUMN endTumourReferenceFragmentCount endTumorReferenceFragmentCount int;
2 changes: 1 addition & 1 deletion pom.xml
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Expand Up @@ -55,7 +55,7 @@
<hmf-extensions.version>local-SNAPSHOT</hmf-extensions.version>

<hmf-patient-db.version>3.19</hmf-patient-db.version>
<hmf-variant-annotation.version>2.13</hmf-variant-annotation.version>
<hmf-variant-annotation.version>2.14</hmf-variant-annotation.version>
<hmf-sv-analyser.version>1.0</hmf-sv-analyser.version>
<hmf-sv-graphs.version>1.0</hmf-sv-graphs.version>

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