MAINT: update nomeclature around metagenome distro

caporaso-lab · Jan 8, 2025 · 7b10bbb · 7b10bbb
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diff --git a/book/back-matter/glossary.md b/book/back-matter/glossary.md
@@ -34,7 +34,7 @@ Directory Format
 
 Distribution
   A collection of QIIME 2 plugins that are installed together through a single {term}`conda metapackage`.
-  These are generally grouped by a theme. For example, the *amplicon distribution* provides a collection of plugins for analysis of microbiome amplicon data, while the *metagenome distribution* provides a collection of plugins for analysis of microbiome shotgun metagenomics data.
+  These are generally grouped by a theme. For example, the *amplicon distribution* provides a collection of plugins for analysis of microbiome amplicon data, while MOSHPIT (previously the *metagenome distribution*) provides a collection of plugins for analysis of microbiome shotgun metagenomics data.
   When a distribution is installed, that particular installation of QIIME 2 is an example of a {term}`deployment`.
 
 DRY

diff --git a/book/plugins/how-to-guides/maximize-compatibility.md b/book/plugins/how-to-guides/maximize-compatibility.md
@@ -15,7 +15,7 @@ The Caporaso Lab is not taking on new responsibility for distributing plugins ri
 
 You can consider the existing distributions to be foundations that you can build on, or you can create and distribute your own conda metapackages.
 Some guidance on each of these approaches:
-   - Your install instructions can indicate that a user should install whichever distribution you depend on (e.g., `tiny`, `amplicon`, or `metagenome`) and then illustrate how to install your plugin(s) in that environment however it makes sense (e.g., `conda` or `pip`). Complete install instructions are drafted for you in the `README.md` of plugins that you build using our template (see [](plugin-from-template)).
+   - Your install instructions can indicate that a user should install whichever distribution you depend on (e.g., `tiny`, `amplicon`, or `MOSHPIT`) and then illustrate how to install your plugin(s) in that environment however it makes sense (e.g., `conda` or `pip`). Complete install instructions are drafted for you in the `README.md` of plugins that you build using our template (see [](plugin-from-template)).
    - Alternatively, you can compose and share your own distribution of plugins (e.g., building from the `tiny` distribution) that captures the set of functionality you’d like to share.
 
 Either of these approaches is totally fine, with the following caveats.

diff --git a/book/plugins/how-to-guides/set-up-development-environment.md b/book/plugins/how-to-guides/set-up-development-environment.md
@@ -27,7 +27,7 @@ conda update conda
 The QIIME 2 "Tiny Distribution" is a minimal set of QIIME 2 functionality for building and using plugins through the QIIME 2 command line, and is intended for use by developers who want a minimal QIIME 2 environment to work in.
 
 ```{note}
-We recommend starting your development with the "Tiny Distribution", unless you specifically need plugins that are installed in other QIIME 2 distributions, such as the "Amplicon" or "Metagenome" distributions, in which case see [](other-distros).
+We recommend starting your development with the "Tiny Distribution", unless you specifically need plugins that are installed in other QIIME 2 distributions, such as the Amplicon Distribution or MOSHPIT (previously known as the Metagenome Distribution), in which case see [](other-distros).
 ```
 
 `````{tab-set}
@@ -145,24 +145,24 @@ conda config --env --set subdir osx-64
 ````
 `````
 
-### Metagenome distribution
+### MOSHPIT (previously known as the *Metagenome distribution*)
 
 `````{tab-set}
 ````{tab-item} macOS
 ```bash
-conda env create -n q2dev-metagenome --file https://raw.githubusercontent.com/qiime2/distributions/dev/latest/passed/qiime2-metagenome-macos-latest-conda.yml
+conda env create -n moshpit-dev --file https://raw.githubusercontent.com/qiime2/distributions/dev/latest/passed/qiime2-metagenome-macos-latest-conda.yml
 ```
 ````
 
 ````{tab-item} Linux
 ```bash
-conda env create -n q2dev-metagenome --file https://raw.githubusercontent.com/qiime2/distributions/dev/latest/passed/qiime2-metagenome-ubuntu-latest-conda.yml
+conda env create -n moshpit-dev --file https://raw.githubusercontent.com/qiime2/distributions/dev/latest/passed/qiime2-metagenome-ubuntu-latest-conda.yml
 ```
 ````
 
 ````{tab-item} macOS (Apple Silicon)
 ```bash
-CONDA_SUBDIR=osx-64 conda env create -n q2dev-metagenome --file https://raw.githubusercontent.com/qiime2/distributions/dev/latest/passed/qiime2-metagenome-macos-latest-conda.yml
+CONDA_SUBDIR=osx-64 conda env create -n moshpit-dev --file https://raw.githubusercontent.com/qiime2/distributions/dev/latest/passed/qiime2-metagenome-macos-latest-conda.yml
 conda config --env --set subdir osx-64
 ```
 ````