4.2.20240425
Moderate release:
- Allows user to use roary for multiple sequence alignment with aligner param (param.aligner = 'panaroo' as default)
- Updates AMRFinder container to 3.12.8-2024-01-31.1_2
- Updates datasets to 16.10.3
- Updates mlst to 2.23.0-2024-04-01
- Updates plasmidfinder to 2.1.6_2024-03-07
- Updates Seqsero2 to 1.3.1
- Updates serotypefinder to 2.0.2