Feat/taxref group3 inpn (#447)

* fix(db): add group3_inpn to taxref model

* feat(api): specific route to get a list of group3

* Add group3 to taxon info

* Test test_get_groupe3_inpn and format of taxrefDetail response

* Changelog

---------

Co-authored-by: Maxime Vergez <[email protected]>

apptax/taxonomie/models.py

@@ -122,6 +122,7 @@ class Taxref(db.Model):
     nom_vern_eng = db.Column(db.Unicode)
     group1_inpn = db.Column(db.Unicode)
     group2_inpn = db.Column(db.Unicode)
+    group3_inpn = db.Column(db.Unicode)
     url = db.Column(db.Unicode)
 
     @hybrid_property

apptax/taxonomie/routestaxref.py

@@ -160,6 +160,7 @@ def getTaxrefDetail(id):
             Taxref.nom_vern,
             Taxref.group1_inpn,
             Taxref.group2_inpn,
+            Taxref.group3_inpn,
             Taxref.id_rang,
             BibTaxrefRangs.nom_rang,
             BibTaxrefStatus.nom_statut,
@@ -330,6 +331,20 @@ def get_regneGroup2Inpn_taxref():
     return results
 
 
+@adresses.route("/groupe3_inpn", methods=["GET"])
+@json_resp
+def get_group3_inpn_taxref():
+    """
+    Retourne la liste des groupes 3 inpn
+    """
+    data = (
+        db.session.query(Taxref.group3_inpn)
+        .distinct(Taxref.group3_inpn)
+        .filter(Taxref.group3_inpn != None)
+    ).all()
+    return [d[0] for d in data]
+
+
 @adresses.route("/allnamebylist/<string:code_liste>", methods=["GET"])
 @adresses.route("/allnamebylist", methods=["GET"])
 @json_resp

apptax/tests/test_taxref.py

@@ -24,6 +24,37 @@ class TestAPITaxref:
         ]
     )
 
+    schema_taxref_detail = Schema(
+        {
+            "cd_nom": int,
+            "cd_ref": int,
+            "cd_sup": int,
+            "cd_taxsup": int,
+            "phylum": str,
+            "regne": str,
+            Optional("classe"): str,
+            "ordre": str,
+            "famille": str,
+            "group1_inpn": str,
+            "group2_inpn": str,
+            "group3_inpn": str,
+            "id_rang": str,
+            "nom_complet": str,
+            "nom_habitat": str,
+            "nom_rang": str,
+            "nom_statut": str,
+            "nom_valide": str,
+            "nom_vern": str,
+            "status": dict,
+            "synonymes": [
+                {
+                    "cd_nom": int,
+                    "nom_complet": str,
+                }
+            ],
+        }
+    )
+
     def test_get_allnamebyListe_routes(self):
         query_string = {"limit": 10}
         response = self.client.get(
@@ -103,6 +134,9 @@ def test_searchfield_routes(self):
     def test_taxrefDetail_routes(self):
         response = self.client.get(url_for("taxref.getTaxrefDetail", id=29708))
         assert response.status_code == 200
+        data = response.json
+        if data:
+            assert self.schema_taxref_detail.is_valid(data)
 
     def test_searchTaxref_routes(self):
         query_string = {"ilike-classe": "hex", "page": 1, "limit": 10}
@@ -125,3 +159,11 @@ def test_taxrefversion_routes(self):
         response = self.client.get(url_for("taxref.getTaxrefVersion"))
         assert response.status_code == 200
         assert json.loads(response.data)["version"] == 16
+
+    def test_get_groupe3_inpn(self):
+        response = self.client.get(url_for("taxref.get_group3_inpn_taxref"))
+
+        assert response.status_code == 200
+        response_json = response.json
+        assert "Coléoptères" in response_json
+        assert "Autres" in response_json

docs/changelog.md

@@ -1,3 +1,12 @@
+1.13.1 (unrelease)
+===================
+
+
+**🚀 Nouveautés**
+
+* Ajout de la colonne `group3_inpn` à la table taxref et à la réponse de la route `getTaxonDetail` (#447)
+* Ajout d'une route listant les group3 `/groupe3_inpn` (#447)
+
 1.13.0 (2023-10-25)
 ===================