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STRetch v0.2.0
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@hdashnow hdashnow released this 18 Jul 01:56
· 125 commits to master since this release
v0.2.0
27015bb
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Learn about vigilant mode.
  • Reimplement estimateSTR.R in Python (now estimateSTR.py), removing R as a STRetch dependancy
  • Generate more informative error messages for example for missing bam file CIGAR strings, empty or missing intermediate files, no reads aligned to STR decoys
  • Stricter p value correction
  • Script to convert Tandem Repeats Finder dat format to bed format, allowing custom reference genomes to be used ('TRFdat_to_bed.py')
  • Updates to comply with latest version of Pandas (v0.23.x)
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