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Post SIM-5 changes#31

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rbeyer merged 60 commits intomainNeoGeographyToolkit/vipersci:mainfrom post-SIM5-changesNeoGeographyToolkit/vipersci:post-SIM5-changesCopy head branch name to clipboardJan 26, 2024

+3,957-316

Commits

Commits on Oct 24, 2023

• feat(image_requests.py): Added to status enum.

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• feat(ptu_records.py): Added tables for PTU data.

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• feat(image_tags.py): Added "missing row(s)" tag.

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• feat(pano_records.py & create_pano.py): Various updates to better support the data.

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• feat(nss_simulator.py): Update to nodata values.

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• feat(image_statistics.py): Added additional stats.

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Commits on Oct 25, 2023

• feat(get_position.py): Added.

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• feat(image_requests.py): Added NOT_OBTAINABLE value to enum.

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• feat(anom_pixel.py): Added.

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• Bump version: 0.6.1 → 0.7.0-dev

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• feat(anom_pixel.py): Added command-line tolerance specifier.

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Commits on Oct 27, 2023

• feat(image_statistics.py): Added pprint() function.

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• fix(image_records.py): Was not handling a SLoG pid on __init__() correctly.

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• fix(create_image.py): Needed a session.commit() to ensure INSERT on the db.

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• feat(create_vis_dbs.py): Now handles spatialite databases.

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• feat(create_raw.py): Added capability to report data quality and observational intent.

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• style(various): lint updates.

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Commits on Oct 28, 2023

• style(various): mypy updates.

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Commits on Nov 2, 2023

• refactor(xml.py): Moved the find_text() convenience function out of image_records.py and into xml.py

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• feat(create_raw.py): Changed the "raw" collection name to its proper "data_raw" form.

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Commits on Nov 9, 2023

• feat(labelmaker & bundle_install): Added these to the repo.

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• feat(image_records.py): Added Purpose Enum and verification_purpose column to allow VIS operator to specify this.

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Commits on Nov 23, 2023

• feat(nss_modeler.py): The write_tiff method now returns the path where it wrote the TIFF file.

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• refactor(pds.__init__.py and various): Created a top-level Purpose Enum to be used in the module.

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• feat(pano_records.py): Set start time from source products when possible.

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• feat(create_pano.py): Added mechanism to extract times and purposes from the source image_records. Also added dummy pan/tilt info.

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Commits on Nov 25, 2023

• feat(pano_check.py): Now properly ignores stereo pairs if left and right have the same timestamp. Also added entry point.

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• feat(create_pano.py): Can now be given a directory to prepend to inputs when looking for files.

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• feat(template_test.py): Removed, labelmaker generic does this work now.

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Commits on Nov 27, 2023

• refactor(pds/__init__.py and create_raw.py): Consolidated some fucntions to the top-level module.

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• refactor(pano_records.py): label_dict function is really for making PDS XML labels, doesn't belong here.

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• feat(create_pano_product.py): Added.

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• refactor(create_pano.py and pds/__init__.py): Lint cleanup

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Commits on Nov 29, 2023

• feat(create_pano.py): Removed vestigal components for when this module also wrote PDS products.

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Commits on Nov 30, 2023

• test(various): Added a bunch of new tests.

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• fix(bundle_install.py): Subdirectories in source collections will now be properly built in output.

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Commits on Dec 1, 2023

• chore(.gitignore): Ignore PyCharm .idea directory.

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Commits on Dec 11, 2023

• feat(image_statistics.py): Added central_clear metric and experimental aggregate_noise function.

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• fix(anom_pixel.py): Previously, the difference math was being done with unsigned ints which wrapped around.

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Commits on Dec 15, 2023

• feat(create_raw.py vis/pds/__init__.py pds/labelmaker/__init__.py): Observing systems are not unique on their lids, but on their Names.

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Commits on Dec 29, 2023

• feat(create_mmgis_pano.py): Added.

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• feat(image_requests.py): Added asdict() method.

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• feat(pano-template.xml and raw-template.xml): Updated to PDS information model 21.

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• fix( raw-template.xml): Apparently you can only have one img:Image_Filter item.

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• fix(create_image.py and create_raw.py): Deal with the fact that an 8-bit image is not an UnsignedLSB1, but an UnsignedByte.

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• fix(create_pano_product.py): Source lidvids need to be FULL lidvids. Faking the vid for now.

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• fix(test_create_raw.py and test_labelmaker.py): Updated tests for recent changes.

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• refactor(create_mmgis_pano.py): lint cleanup

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• refactor(various): more lint cleanup

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Commits on Dec 30, 2023

• refactor(pds/__init__.py and create_pano_product): Switch testing PDS version to 99.99

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Commits on Jan 10, 2024

• feat(image_records.py): If the captureId is larger than 16 bits, then assume the last 16 bits are a Science Request ID.

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• feat(create_raw.py): Changes to enable operation on sqlite databases.

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Commits on Jan 12, 2024

• fix(pds/__init__.py): The instrument context is "viper.vis" not "spacecraft.vis"

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• feat(bundle_install.py): Made this more flexible for lidvid_reference and lid_reference.

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• feat(create_browse.py and others): Added create_browse

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• refactor(util.py and others): Created centralized function that takes a PathLike and returns an md5.hexdigest string.

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Commits on Jan 25, 2024

• fix(create_image.py): Adapted the write_tiff() function to handle bool and int32 arrays, if provided.

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• fix(image_requests.py): Added rover_wait_for column.

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• fix(requirements.txt): Forgot that you import yaml, but pip install

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• test(python-test.yml): Removed the 3.7 tests as Python 3.7 is EoL.

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