notimplementederrors raised on functions not-yet-used. uncomment the …

…help function test in meta.yaml because we DO want those to work

fre/check/frecheck.py

@@ -4,7 +4,7 @@
 
 from .frecheckexample import check_test_function
 
-@click.group(help=click.style(" - access fre check subcommands", fg=(162,91,232)))
+@click.group(help=click.style(" - access fre check subcommands (not implemented yet!)", fg=(162,91,232)))
 def check_cli():
     ''' entry point to fre check click commands '''
 
@@ -13,6 +13,7 @@ def check_cli():
 def function(uppercase):
     """ - Execute fre check test """
     check_test_function(uppercase)
+    raise NotImplementedError('fre check has not been implemented yet!')
 
 if __name__ == "__main__":
     check_cli()

fre/list/frelist.py

@@ -4,7 +4,7 @@
 
 from .frelistexample import list_test_function
 
-@click.group(help=click.style(" - access fre list subcommands", fg=(232,204,91)))
+@click.group(help=click.style(" - access fre list subcommands (not implemented yet!)", fg=(232,204,91)))
 def list_cli():
     ''' entry point to fre list click commands '''
 
@@ -13,6 +13,7 @@ def list_cli():
 def function(uppercase):
     """ - Execute fre list test """
     list_test_function(uppercase)
+    raise NotImplementedError('fre list has not been implemented yet!')
 
 if __name__ == "__main__":
     list_cli()

fre/pp/wrapper_script.py

@@ -20,7 +20,7 @@
 from fre.pp.trigger_script import trigger
 from fre.pp.status_script import status_subtool
 
-def run_all_fre_pp_steps(experiment = None, platform = None, target = None, config_file, branch = None, time = None):
+def run_all_fre_pp_steps(experiment = None, platform = None, target = None, config_file = None, branch = None, time = None):
     '''
     Wrapper script for calling a FRE2 pp experiment with the canopy-style
     infrastructure and fre-cli

fre/run/frerun.py

@@ -5,7 +5,7 @@
 import click
 from .frerunexample import run_test_function
 
-@click.group(help=click.style(" - access fre run subcommands", fg=(164,29,132)))
+@click.group(help=click.style(" - access fre run subcommands (not implemented yet!)", fg=(164,29,132)))
 def run_cli():
     ''' entry point to fre run click commands '''
 
@@ -14,6 +14,7 @@ def run_cli():
 def function(uppercase):
     """ - Execute fre run test """
     run_test_function(uppercase)
+    raise NotImplementedError('fre run has not been implemented yet!')
 
 if __name__ == "__main__":
     run_cli()

fre/test/fretest.py

@@ -14,6 +14,7 @@ def test_cli():
 def function(uppercase):
     """ - Execute fre test test """
     test_test_function(uppercase)
+    raise NotImplementedError('fre test has not been implemented yet!')
 
 if __name__ == "__main__":
     test_cli()

meta.yaml

@@ -56,13 +56,13 @@ test:
     - fre
     - fre.app
     - fre.catalog
-    # - fre.check
+    - fre.check
     - fre.cmor
-    # - fre.list
+    - fre.list
     - fre.make
     - fre.pp
-    # - fre.run
-    # - fre.test
+    - fre.run
+    - fre.test
     - fre.yamltools
   commands:
     - pylint --max-args 6 -ry --ignored-modules netCDF4,cmor fre/ || echo "pylint returned non-zero exit code and will kill the workflow. guarding against this now."
@@ -71,13 +71,13 @@ test:
     - fre --help
     - fre app --help
     - fre catalog --help
-    # - fre check --help
+    - fre check --help
     - fre cmor --help
-    # - fre list --help
+    - fre list --help
     - fre make --help
     - fre pp --help
-    # - fre run --help
-    # - fre test --help
+    - fre run --help
+    - fre test --help
     - fre yamltools --help