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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 39 25

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 216 63

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 464 198

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 131 85

Repositories

Showing 10 of 101 repositories
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 216 Apache-2.0 63 311 (5 issues need help) 19 Updated Jan 17, 2025
  • vcf-js Public

    High performance Variant Call Format (VCF) parser in pure JavaScript

    GMOD/vcf-js’s past year of commit activity
    TypeScript 24 MIT 5 1 0 Updated Jan 16, 2025
  • generic-filehandle2 Public

    modernization of the original generic-filehandle, no Buffer polyfill needed

    GMOD/generic-filehandle2’s past year of commit activity
    TypeScript 0 0 0 0 Updated Jan 16, 2025
  • ixixx-js Public
    GMOD/ixixx-js’s past year of commit activity
    TypeScript 3 MIT 2 1 0 Updated Jan 16, 2025
  • nclist-js Public

    Read JBrowse v1 nested containment list feature stores from modern JS

    GMOD/nclist-js’s past year of commit activity
    TypeScript 0 MIT 0 0 0 Updated Jan 16, 2025
  • indexedfasta-js Public

    Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi

    GMOD/indexedfasta-js’s past year of commit activity
    TypeScript 12 MIT 4 0 1 Updated Jan 16, 2025
  • twobit-js Public

    Read .2bit files with pure JS. Works in node or webpack.

    GMOD/twobit-js’s past year of commit activity
    TypeScript 4 MIT 2 0 0 Updated Jan 16, 2025
  • bed-js Public

    A parser for the BED format including autoSql support

    GMOD/bed-js’s past year of commit activity
    TypeScript 5 1 1 1 Updated Jan 16, 2025
  • tabix-js Public

    Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser

    GMOD/tabix-js’s past year of commit activity
    TypeScript 14 MIT 5 2 0 Updated Jan 16, 2025
  • bbi-js Public

    Parser for bigwig and bigbed files

    GMOD/bbi-js’s past year of commit activity
    TypeScript 8 MIT 6 8 0 Updated Jan 16, 2025
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