From 2e203a9c7aafde0223e57c4b397450ff768b1cca Mon Sep 17 00:00:00 2001 From: PCarme <163283897+PCarme@users.noreply.github.com> Date: Tue, 26 Nov 2024 09:27:06 +0000 Subject: [PATCH] Update jbrowse_track_metadata.csv --- website/jbrowse_track_metadata.csv | 1 + 1 file changed, 1 insertion(+) diff --git a/website/jbrowse_track_metadata.csv b/website/jbrowse_track_metadata.csv index fc25399..443f2fd 100644 --- a/website/jbrowse_track_metadata.csv +++ b/website/jbrowse_track_metadata.csv @@ -331,3 +331,4 @@ Chromatin binding,yes,yes,Rec11 binding sites during meiosis 0h - Fowler et al. Chromatin binding,yes,yes,Rec11 binding sites during meiosis 3h - Fowler et al. 2013,,Rec11,h- pat1-114,WT,,high temperature,meiosis,,ChIP-chip,Fowler,2013,23395004,GEO,GSE43122,GSM1056995,,bigWig,https://www.pombase.org/external_datasets/Fowler_2013_PMID_23395004/Rec11prot3h.bigWig Transcripts,yes,yes,Transcripts during vegetative growth – Blevins (2019),,,CBS 5682,WT,,custom rich media,vegetative growth,,RNA-Seq,Blevins,2019,31053168,BioProject,PRJNA525646,SRS4458819,,rnaseq,https://www.pombase.org/external_datasets/Blevins_2019_PMID_31053168/Spom_mapped_illumina_sorted.bam Transcripts,yes,yes,Transcripts during oxidative stress – Blevins (2019),,,CBS 5682,WT,,custom rich media 1.5 mM H2O2,oxidative stress,,RNA-Seq,Blevins,2019,31053168,BioProject,PRJNA525646,SRS4458802,,rnaseq,https://www.pombase.org/external_datasets/Blevins_2019_PMID_31053168/Spom_mapped_illumina_H2O2_sorted.bam +Genome sequence and features,yes,yes,Novel introns – Bitton et al. (2015),,,,not applicable,not applicable,,,,RNA-Seq,Bitton,2015,25883323,,,,Identification of unnanotated introns in RNA-seq data from 116 samples of various genotypes and growth phases ,BED,https://www.pombase.org/external_datasets/Bitton_2015_PMID_25883323_introns/PMID_25883323_Supplemental_Tables-S12.sorted.bed.gz