From 02de25bae58bed8405d7bf4b06c16273ae047ac6 Mon Sep 17 00:00:00 2001
From: Leila Mansouri <leilosky@hotmail.com>
Date: Tue, 31 Oct 2023 18:39:28 +0100
Subject: [PATCH] fix typo

---
 main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/main.nf b/main.nf
index bb38031..9f11d44 100644
--- a/main.nf
+++ b/main.nf
@@ -102,7 +102,7 @@ ch_exomiser_data = Channel.fromPath("${params.exomiser_data}")
     maxErrors 5
     input:
     set proband_id1, file(vcf_path1), file(vcf_index_path1) from ch_vcf_paths
-    file family_file from ch_vcf.collect()
+    file family_file from ch_families_file.collect()
     output:
     tuple val(proband_id1), file("${proband_id1}-HPO.txt"), file("${proband_id1}.ped"), file("${proband_id1}_ID.txt") into ch_to_join
     script: