diff --git a/build/bibliography.md b/build/bibliography.md
index c228f836..bc17859a 100644
--- a/build/bibliography.md
+++ b/build/bibliography.md
@@ -4,7 +4,7 @@ author:
 bibliography:
 - bibliography.bib
 csl: apa-numeric-superscript-brackets.csl
-date: 2024-08-19
+date: 2025-01-04
 title: "Discourse Network Analysis: Bibliography"
 ---
 
diff --git a/dna/src/main/java/dna/Dna.java b/dna/src/main/java/dna/Dna.java
index d1fc5147..ba690f72 100644
--- a/dna/src/main/java/dna/Dna.java
+++ b/dna/src/main/java/dna/Dna.java
@@ -17,8 +17,8 @@ public class Dna {
 	public static Dna dna;
 	public static Logger logger;
 	public static Sql sql;
-	public static final String date = "2024-10-08";
-	public static final String version = "3.0.11.2";
+	public static final String date = "2025-01-05";
+	public static final String version = "3.0.11.3";
 	public static final String operatingSystem = System.getProperty("os.name");
 	public static File workingDirectory = null;
 	public static Gui gui;
diff --git a/dna/src/main/java/export/Exporter.java b/dna/src/main/java/export/Exporter.java
index a2c03ce2..d676cb18 100644
--- a/dna/src/main/java/export/Exporter.java
+++ b/dna/src/main/java/export/Exporter.java
@@ -3768,7 +3768,6 @@ public double[] evaluateBackboneSolution(String[] backboneEntities, int p) {
 
 		return results;
 	}
-}
 
 	/*
 	 * =============================================================================
diff --git a/rDNA/rDNA/DESCRIPTION b/rDNA/rDNA/DESCRIPTION
index 9aa27312..e7bf94ab 100755
--- a/rDNA/rDNA/DESCRIPTION
+++ b/rDNA/rDNA/DESCRIPTION
@@ -51,4 +51,4 @@ BugReports: https://github.com/leifeld/dna/issues
 License: GPL-3 | file LICENSE
 Encoding: UTF-8
 Language: en-US
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2
diff --git a/rDNA/rDNA/man/as.matrix.dna_network_onemode.Rd b/rDNA/rDNA/man/as.matrix.dna_network_onemode.Rd
index 0c5abb89..6cac8283 100644
--- a/rDNA/rDNA/man/as.matrix.dna_network_onemode.Rd
+++ b/rDNA/rDNA/man/as.matrix.dna_network_onemode.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{as.matrix.dna_network_onemode}
 \alias{as.matrix.dna_network_onemode}
 \title{Convert a \code{dna_network_onemode} object to a matrix}
diff --git a/rDNA/rDNA/man/as.matrix.dna_network_twomode.Rd b/rDNA/rDNA/man/as.matrix.dna_network_twomode.Rd
index ab5aded5..3ecd03e3 100644
--- a/rDNA/rDNA/man/as.matrix.dna_network_twomode.Rd
+++ b/rDNA/rDNA/man/as.matrix.dna_network_twomode.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{as.matrix.dna_network_twomode}
 \alias{as.matrix.dna_network_twomode}
 \title{Convert a \code{dna_network_twomode} object to a matrix}
diff --git a/rDNA/rDNA/man/autoplot.dna_network.Rd b/rDNA/rDNA/man/autoplot.dna_network.Rd
index 08141092..58e2d9f6 100644
--- a/rDNA/rDNA/man/autoplot.dna_network.Rd
+++ b/rDNA/rDNA/man/autoplot.dna_network.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{autoplot.dna_network}
 \alias{autoplot.dna_network}
 \alias{autoplot.dna_network_onemode}
diff --git a/rDNA/rDNA/man/dna_backbone.Rd b/rDNA/rDNA/man/dna_backbone.Rd
index d5bae13d..4ef40ae8 100644
--- a/rDNA/rDNA/man/dna_backbone.Rd
+++ b/rDNA/rDNA/man/dna_backbone.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_backbone.R
 \name{dna_backbone}
 \alias{dna_backbone}
 \alias{print.dna_backbone}
diff --git a/rDNA/rDNA/man/dna_barplot.Rd b/rDNA/rDNA/man/dna_barplot.Rd
index 06dce2f6..4ae40df9 100644
--- a/rDNA/rDNA/man/dna_barplot.Rd
+++ b/rDNA/rDNA/man/dna_barplot.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_barplot.R
 \name{dna_barplot}
 \alias{dna_barplot}
 \alias{print.dna_barplot}
diff --git a/rDNA/rDNA/man/dna_jar.Rd b/rDNA/rDNA/man/dna_jar.Rd
index cfd8f3d5..95332728 100644
--- a/rDNA/rDNA/man/dna_jar.Rd
+++ b/rDNA/rDNA/man/dna_jar.Rd
@@ -2,7 +2,7 @@
 % Please edit documentation in R/rDNA.R
 \name{dna_jar}
 \alias{dna_jar}
-\title{Identify and/or download and install the correct DNA jar file}
+\title{Find the DNA jar file}
 \usage{
 dna_jar()
 }
@@ -11,25 +11,19 @@ The file name of the jar file that matches the installed \pkg{rDNA}
   version, including full path.
 }
 \description{
-Identify and/or download and install the correct DNA jar file.
+Find the DNA jar file in the library path or working directory.
 }
 \details{
-rDNA requires the installation of a DNA jar file to run properly. While it is
-possible to store the jar file in the respective working directory, it is
-preferable to install it in the rDNA library installation directory under
-\code{java/}. The \code{dna_jar} function attempts to find the version of the
-jar file that matches the installed \pkg{rDNA} version in the \code{java/}
-sub-directory of the package library path and return the jar file name
-including its full path. If this fails, it will try to find the jar file in
-the current working directory and return its file name. If this fails as
-well, it will attempt to download the matching jar file from GitHub and store
-it in the library path and return its file name. If this fails, it will
-attempt to store the downloaded jar file in the working directory and return
-its file name. If this fails as well, it will clone the current DNA master
-code from GitHub to a local temporary directory, build the jar file from
-source, and attempt to store the built jar file in the library path or, if
-this fails, in the working directory and return the file name of the jar
-file. If all of this fails, an error message is thrown.
+rDNA requires the installation of a DNA jar file to run properly. The jar
+file is shipped with the rDNA package and is installed in the \code{java/}
+directory of the package installation directory in the R library tree. The
+version number of the jar file and the rDNA package must match for DNA and
+rDNA to be able to work together. The \code{dna_jar} function looks for
+the jar file in the package installation directory sub-directory and
+returns its file name with its absolute path. If it cannot be found in the
+installation directory, the function looks in the current working
+directory. The function is also called by \code{\link{dna_init}} if the
+location of the jar file is not provided explicitly.
 }
 \seealso{
 Other startup: 
diff --git a/rDNA/rDNA/man/dna_multiclust.Rd b/rDNA/rDNA/man/dna_multiclust.Rd
index 87ea34bc..537d3ee4 100644
--- a/rDNA/rDNA/man/dna_multiclust.Rd
+++ b/rDNA/rDNA/man/dna_multiclust.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_multiclust.R
 \name{dna_multiclust}
 \alias{dna_multiclust}
 \alias{print.dna_multiclust}
diff --git a/rDNA/rDNA/man/dna_network.Rd b/rDNA/rDNA/man/dna_network.Rd
index e44579fd..000ec729 100644
--- a/rDNA/rDNA/man/dna_network.Rd
+++ b/rDNA/rDNA/man/dna_network.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{dna_network}
 \alias{dna_network}
 \title{Compute and retrieve a network}
diff --git a/rDNA/rDNA/man/dna_phaseTransitions.Rd b/rDNA/rDNA/man/dna_phaseTransitions.Rd
index 3c8d1561..f745d938 100644
--- a/rDNA/rDNA/man/dna_phaseTransitions.Rd
+++ b/rDNA/rDNA/man/dna_phaseTransitions.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_phaseTransitions.R
 \name{dna_phaseTransitions}
 \alias{dna_phaseTransitions}
 \alias{print.dna_phaseTransitions}
diff --git a/rDNA/rDNA/man/dna_tidygraph.Rd b/rDNA/rDNA/man/dna_tidygraph.Rd
index 1b67677a..cb0b4c70 100644
--- a/rDNA/rDNA/man/dna_tidygraph.Rd
+++ b/rDNA/rDNA/man/dna_tidygraph.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{dna_tidygraph}
 \alias{dna_tidygraph}
 \title{Convert a DNA network into a \code{tbl_graph} or \code{graph} object}
diff --git a/rDNA/rDNA/man/print.dna_network_onemode.Rd b/rDNA/rDNA/man/print.dna_network_onemode.Rd
index b243ff63..d49009eb 100644
--- a/rDNA/rDNA/man/print.dna_network_onemode.Rd
+++ b/rDNA/rDNA/man/print.dna_network_onemode.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{print.dna_network_onemode}
 \alias{print.dna_network_onemode}
 \title{Print a \code{dna_network_onemode} object}
diff --git a/rDNA/rDNA/man/print.dna_network_twomode.Rd b/rDNA/rDNA/man/print.dna_network_twomode.Rd
index 6ddbdb57..41866f10 100644
--- a/rDNA/rDNA/man/print.dna_network_twomode.Rd
+++ b/rDNA/rDNA/man/print.dna_network_twomode.Rd
@@ -1,5 +1,5 @@
 % Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/rDNA.R
+% Please edit documentation in R/dna_network.R
 \name{print.dna_network_twomode}
 \alias{print.dna_network_twomode}
 \title{Print a \code{dna_network_twomode} object}