From d946685f2fe1ad458ef646601d3fb8e0b4a687bb Mon Sep 17 00:00:00 2001 From: Pedro Mendes Date: Wed, 30 Oct 2024 09:26:03 -0400 Subject: [PATCH] comment out pypi instructions until it is there --- README.md | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 3e673da..71952ca 100644 --- a/README.md +++ b/README.md @@ -18,14 +18,15 @@ Practical uses of *sbmodelr* include: - use a gene transcription model to create a gene regulatory network - use a neuron model (e.g. the Hodgkin-Huxley) to create a network of neurons -The output of this program is a new model file with the more complex model. It is expected that the user may still have to tune parts of the resulting model in a regular modeling tool, such as [COPASI](https://copasi.org), [VCell](https://vcell.org), etc, where the model will be used for simulations. (*sbmodelr* only creates models, it does not carry out any simulation) +The output of this program is a new model file with the more complex model. It is expected that the user may still have to tune parts of the resulting model in a regular modeling tool, such as [COPASI](https://copasi.org), [VCell](https://vcell.org), etc, where the model will be used for simulations. (*sbmodelr* only creates models, it does not carry out simulations.) ## Installation -The package works with python 3.7+, provided the package *copasi-basico*, that is freely available on pypi, is installed. +The package works with python 3.7+, provided the package *copasi-basico* is installed (freely available on pypi). You can then install *sbmodelr* and all its dependencies by running `setup.py`. + ## Usage