From bccb30638daa4bce997b5f0159f1d1a806ed588b Mon Sep 17 00:00:00 2001 From: Jessica Gadling Date: Thu, 16 Jan 2025 10:46:50 -0800 Subject: [PATCH] chore: Updating dependencies. (#123) * Updating dependencies, including strawberry-graphql. --- .github/workflows/build-and-push.yml | 1 - README.md | 2 +- platformics/cli/generate_token.py | 4 +- platformics/cli/main.py | 4 +- .../graphql_api/types/class_name.py.j2 | 1 - platformics/graphql_api/core/error_handler.py | 5 + .../graphql_api/core/strawberry_extensions.py | 37 +- platformics/graphql_api/relay/fields.py | 8 +- platformics/graphql_api/relay/types.py | 10 +- platformics/graphql_api/setup.py | 7 +- platformics/settings.py | 1 - poetry.lock | 2711 +++++++++-------- pyproject.toml | 6 +- test_app/poetry.lock | 1197 ++++---- test_app/pyproject.toml | 4 +- 15 files changed, 2082 insertions(+), 1916 deletions(-) diff --git a/.github/workflows/build-and-push.yml b/.github/workflows/build-and-push.yml index 75a6956..1981556 100644 --- a/.github/workflows/build-and-push.yml +++ b/.github/workflows/build-and-push.yml @@ -55,4 +55,3 @@ jobs: - name: Publish package distributions to PyPI uses: pypa/gh-action-pypi-publish@release/v1 - diff --git a/README.md b/README.md index 6a4c78d..eb5a1e7 100644 --- a/README.md +++ b/README.md @@ -45,7 +45,7 @@ The libraries and tools that make Platformics work: 5. Run `make token` to generate an authorization token that you can use to interact with the API. The `make` target copies the necessary headers to the system clipboard. Paste the token into the `headers` section at the bottom of the GraphQL explorer API ## Versioning platformics -Platformics can be used in downstream applications by +Platformics can be used in downstream applications by 1) using the platformics image as the base Docker image. To select a version of platformics, add the appropriate version tags to the docker image 2) installing as a dependency, `pip install platformics`. diff --git a/platformics/cli/generate_token.py b/platformics/cli/generate_token.py index de21d41..0fcd904 100755 --- a/platformics/cli/generate_token.py +++ b/platformics/cli/generate_token.py @@ -4,7 +4,7 @@ import click from platformics.security.token_auth import create_token -from platformics.settings import Settings +from platformics.settings import APISettings @click.group() @@ -47,7 +47,7 @@ def auth() -> None: ) @click.pass_context def generate_token(ctx: click.Context, userid: int, project: list[str], expiration: int) -> None: - settings = Settings.model_validate({}) + settings = APISettings.model_validate({}) private_key = settings.JWK_PRIVATE_KEY project_roles: dict[str, list[int]] = {"member": [], "owner": [], "viewer": []} diff --git a/platformics/cli/main.py b/platformics/cli/main.py index 4dbb989..c7b0b55 100644 --- a/platformics/cli/main.py +++ b/platformics/cli/main.py @@ -9,7 +9,7 @@ from platformics.codegen.generator import generate from platformics.security.token_auth import create_token -from platformics.settings import Settings +from platformics.settings import APISettings @click.group() @@ -76,7 +76,7 @@ def auth() -> None: ) @click.pass_context def generate_token(ctx: click.Context, userid: int, project: list[str], expiration: int) -> None: - settings = Settings.model_validate({}) + settings = APISettings.model_validate({}) private_key = settings.JWK_PRIVATE_KEY project_roles: dict[str, list[int]] = {"member": [], "owner": [], "viewer": []} diff --git a/platformics/codegen/templates/graphql_api/types/class_name.py.j2 b/platformics/codegen/templates/graphql_api/types/class_name.py.j2 index 23023c9..a300918 100644 --- a/platformics/codegen/templates/graphql_api/types/class_name.py.j2 +++ b/platformics/codegen/templates/graphql_api/types/class_name.py.j2 @@ -44,7 +44,6 @@ from sqlalchemy import inspect from sqlalchemy.engine.row import RowMapping from sqlalchemy.ext.asyncio import AsyncSession from platformics.graphql_api import relay -from strawberry.field import StrawberryField from strawberry.types import Info from support.limit_offset import LimitOffsetClause from typing_extensions import TypedDict diff --git a/platformics/graphql_api/core/error_handler.py b/platformics/graphql_api/core/error_handler.py index a610699..c4b8933 100644 --- a/platformics/graphql_api/core/error_handler.py +++ b/platformics/graphql_api/core/error_handler.py @@ -45,6 +45,11 @@ class DefaultExceptionHandler(ExceptionHandler): error_message: str = "Unexpected error." def convert_exception(self, err: Any) -> list[GraphQLError]: + try: + if isinstance(err, GraphQLError) and not err.original_error: + return [err] + except AttributeError: + pass return [ GraphQLError( message=self.error_message, diff --git a/platformics/graphql_api/core/strawberry_extensions.py b/platformics/graphql_api/core/strawberry_extensions.py index 78232f7..29c9a2b 100644 --- a/platformics/graphql_api/core/strawberry_extensions.py +++ b/platformics/graphql_api/core/strawberry_extensions.py @@ -8,8 +8,8 @@ from fastapi.dependencies.models import Dependant from fastapi.params import Depends as DependsClass from strawberry.extensions import FieldExtension -from strawberry.field import StrawberryField from strawberry.types import Info +from strawberry.types.field import StrawberryField def get_func_with_only_deps(func: typing.Callable[..., typing.Any]) -> typing.Callable[..., typing.Any]: @@ -61,27 +61,22 @@ async def resolve_async( except AttributeError: request.context = {"dependency_cache": {}} - if not request.scope.get("sberrystack"): + async with AsyncExitStack() as async_exit_stack: request.scope["sberrystack"] = AsyncExitStack() - solved_result = await deputils.solve_dependencies( - request=request, - dependant=self.dependant, - body={}, - dependency_overrides_provider=request.app, - dependency_cache=request.context["dependency_cache"], - async_exit_stack=request.scope["sberrystack"], - ) - ( - solved_values, - _, # solver_errors. It shouldn't be possible for it to contain - # anything relevant to this extension. - _, # background tasks - _, # the subdependency returns the same response we have - new_cache, # sub_dependency_cache - ) = solved_result + solved_result = await deputils.solve_dependencies( + request=request, + dependant=self.dependant, + body={}, + dependency_overrides_provider=request.app, + dependency_cache=request.context["dependency_cache"], + async_exit_stack=async_exit_stack, + embed_body_fields=False, + ) + solved_values = solved_result.values + new_cache = solved_result.dependency_cache + request.context["dependency_cache"].update(new_cache) - request.context["dependency_cache"].update(new_cache) - kwargs = solved_values | kwargs # solved_values has None values that need to be overridden by kwargs - res = await next_(source, info, **kwargs) + kwargs = solved_values | kwargs # solved_values has None values that need to be overridden by kwargs + res = await next_(source, info, **kwargs) return res diff --git a/platformics/graphql_api/relay/fields.py b/platformics/graphql_api/relay/fields.py index 317977f..e335c2c 100644 --- a/platformics/graphql_api/relay/fields.py +++ b/platformics/graphql_api/relay/fields.py @@ -25,16 +25,16 @@ import strawberry from strawberry.annotation import StrawberryAnnotation -from strawberry.arguments import StrawberryArgument, argument from strawberry.extensions.field_extension import ( AsyncExtensionResolver, FieldExtension, SyncExtensionResolver, ) -from strawberry.field import _RESOLVER_TYPE, StrawberryField, field -from strawberry.lazy_type import LazyType -from strawberry.type import StrawberryList, StrawberryOptional +from strawberry.types.arguments import StrawberryArgument, argument +from strawberry.types.base import StrawberryList, StrawberryOptional +from strawberry.types.field import _RESOLVER_TYPE, StrawberryField, field from strawberry.types.fields.resolver import StrawberryResolver +from strawberry.types.lazy_type import LazyType from strawberry.utils.aio import asyncgen_to_list from strawberry.utils.typing import eval_type from typing_extensions import Annotated, get_origin diff --git a/platformics/graphql_api/relay/types.py b/platformics/graphql_api/relay/types.py index d688245..ef2a1e1 100644 --- a/platformics/graphql_api/relay/types.py +++ b/platformics/graphql_api/relay/types.py @@ -24,15 +24,15 @@ ) import strawberry -from strawberry.field import field -from strawberry.object_type import interface, type -from strawberry.private import StrawberryPrivate # from strawberry.relay import GlobalID # from strawberry.relay import Node as StrawberryNode -from strawberry.type import StrawberryContainer, get_object_definition +from strawberry.types import get_object_definition +from strawberry.types.base import StrawberryContainer, StrawberryObjectDefinition +from strawberry.types.field import field from strawberry.types.info import Info # noqa: TCH001 -from strawberry.types.types import StrawberryObjectDefinition +from strawberry.types.object_type import interface, type +from strawberry.types.private import StrawberryPrivate from strawberry.utils.aio import aenumerate, aislice, resolve_awaitable from strawberry.utils.inspect import in_async_context from strawberry.utils.typing import eval_type, is_classvar diff --git a/platformics/graphql_api/setup.py b/platformics/graphql_api/setup.py index e4fb231..e469958 100644 --- a/platformics/graphql_api/setup.py +++ b/platformics/graphql_api/setup.py @@ -55,7 +55,12 @@ def get_graphql_name(self, obj: HasGraphQLName) -> str: return super().get_graphql_name(obj) -def get_app(settings: APISettings, schema: strawberry.Schema, db_module: typing.Any, dependencies: typing.Optional[typing.Sequence[Depends]] = []) -> FastAPI: +def get_app( + settings: APISettings, + schema: strawberry.Schema, + db_module: typing.Any, + dependencies: typing.Optional[typing.Sequence[Depends]] = [], +) -> FastAPI: """ Make sure tests can get their own instances of the app. """ diff --git a/platformics/settings.py b/platformics/settings.py index 6b12536..3bc981a 100644 --- a/platformics/settings.py +++ b/platformics/settings.py @@ -69,7 +69,6 @@ class APISettings(Settings): DEFAULT_UPLOAD_BUCKET: str DEFAULT_UPLOAD_PROTOCOL: str - @cached_property def JWK_PRIVATE_KEY(self) -> jwk.JWK: # noqa: N802 key = None diff --git a/poetry.lock b/poetry.lock index 75c2c60..f53effc 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,14 +1,14 @@ -# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.0 and should not be changed by hand. 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